BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB007H10LP1|AL425782
(830 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1264 1583 0.0
>3x_Contig1264
Length = 6524
Score = 1583 bits (795), Expect = 0.0
Identities = 820/831 (98%), Gaps = 1/831 (0%)
Strand = Plus / Plus
Query: 1 atctgttgggatattatcagatggtagttaagcacctaaaggtgttggtttcactctcgt 60
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 1580 atctgttgggatattatcagatggtagtaaagcacctaaaggtgttggtttcactctcgt 1639
Query: 61 tttccaaagattttcaatctttagaagtttattgatatcatcgacgaacaatttctttaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1640 tttccaaagattttcaatctttagaagtttattgatatcatcgacgaacaatttctttaa 1699
Query: 121 aatatctgtgattttcgtctcatcgccggacttgactaactgctggagagcatgttattc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 1700 aatatctgtgattttcgtctcatcgccggacttgactaactgctggagagcatgtaattc 1759
Query: 181 gttagtctcctctttgatgcgggcgatttcttctttatcatcagtacctaaatcttgatc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1760 gttagtctcctctttgatgcgggcgatttcttctttatcatcagtacctaaatcttgatc 1819
Query: 241 atttacggtctcttctgaggattctgcaaaaagttggccaaataggaaattcttggccca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1820 atttacggtctcttctgaggattctgcaaaaagttggccaaataggaaattcttggccca 1879
Query: 301 aaccacacagtggattggctgttatggcgtggatctaatggtacagaccgggaacgtagt 360
||||||||||||| |||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 1880 aaccacacagtggcttggctgtgatggcgtggatctaatggtacagaccgggaacgtagt 1939
Query: 361 tggtgtctccttagtggtgcaatcaaagcattcagtgacacttgggaagattggctgtat 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1940 tggtgtctccttagtggtgcaatcaaagcattcagtgacacttgggaagattggctgtat 1999
Query: 421 gtatccatcgaatcccgaagtcccagattcgatmaaaggtttattagtgaactgacacat 480
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 2000 gtatccatcgaatcccgaagtcccagattcgatcaaaggtttattagtgaactgacacat 2059
Query: 481 cttattgamgtatmttmttgccgctagattgtccaatgcattgtatataatcgaaaactg 540
|||||||| |||| || |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2060 cttattgacgtatcttcttgccgctagattgtccaatgcattgtatataatcgaaaactg 2119
Query: 541 atcaaaccacgaaagtgggaacttttctgtatccatgatattattctgatatgaaactag 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2120 atcaaaccacgaaagtgggaacttttctgtatccatgatattattctgatatgaaactag 2179
Query: 601 tttagagttgctgaacctttgaactgctttcattgcagtdttacttttaggttgtttaat 660
||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 2180 tttagagttgctgaacctttgaactgctttcattgcagtattacttttaggttgtttaat 2239
Query: 661 atctctcttcctaaataaaaactgtctgttcaaattcgataaatcaatagtgtccaaatc 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2240 atctctcttcctaaataaaaactgtctgttcaaattcgataaatcaatagtgtccaaatc 2299
Query: 721 aacgatatggatttcacctatttccaacaaaatcaaatccttcaaaagctcacagccaat 780
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 2300 aacgatatggatttcacctatttccaacaaaatcaaatccttcaaaagctcacagccaat 2359
Query: 781 tccacctgcgccaacaagtaacaccttcatatcgcgcmg-ttttcaaagct 830
||||||||||||||||||||||||||||||||||||| | |||||||||||
Sbjct: 2360 tccacctgcgccaacaagtaacaccttcatatcgcgcagcttttcaaagct 2410
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.712 1.31
Gapped
Lambda K H
1.38 0.712 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 6564
Number of Sequences: 1807
Number of extensions: 6564
Number of successful extensions: 45
Number of sequences better than 1.0e-20: 1
length of query: 830
length of database: 10,358,551
effective HSP length: 16
effective length of query: 814
effective length of database: 10,329,639
effective search space: 8408326146
effective search space used: 8408326146
T: 0
A: 40
X1: 6 (12.0 bits)
X2: 15 (29.9 bits)
S1: 12 (24.4 bits)
S2: 50 (100.1 bits)